MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,736
rRNA: 15
tRNA: 60
tmRNA: 1
Total number of protein coding genes annotated/found:
2,715
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Items 41 - 60
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5041|JADGLJ010000001.1
MBF0812585.1
Genome Viewer
NA
AA
1683/561
539893-538211
choline dehydrogenase
SEQF5041|JADGLJ010000001.1
MBF0812586.1
Genome Viewer
NA
AA
1494/498
541446-539953
betaine-aldehyde dehydrogenase
SEQF5041|JADGLJ010000004.1
MBF0813712.1
Genome Viewer
NA
AA
1359/453
209373-210731
adenosylmethionine--8-amino-7-oxononanoate transaminase
SEQF5041|JADGLJ010000004.1
MBF0813713.1
Genome Viewer
NA
AA
990/330
210733-211722
biotin synthase BioB
SEQF5041|JADGLJ010000004.1
MBF0813711.1
Genome Viewer
NA
AA
672/224
208709-209380
dethiobiotin synthase
SEQF5041|JADGLJ010000002.1
MBF0813113.1
Genome Viewer
NA
AA
861/287
494278-493418
class A beta-lactamase
SEQF5041|JADGLJ010000003.1
MBF0813517.1
Genome Viewer
NA
AA
1344/448
393938-392595
branched-chain amino acid transport system II carrier protein
SEQF5041|JADGLJ010000004.1
MBF0813843.1
Genome Viewer
NA
AA
1302/434
360856-359555
branched-chain amino acid transport system II carrier protein
SEQF5041|JADGLJ010000005.1
MBF0813896.1
Genome Viewer
NA
AA
1149/383
30927-29779
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA
SEQF5041|JADGLJ010000002.1
MBF0813064.1
Genome Viewer
NA
AA
666/222
440756-441421
bacillithiol biosynthesis deacetylase BshB2
SEQF5041|JADGLJ010000003.1
MBF0813277.1
Genome Viewer
NA
AA
1614/538
114331-115944
bacillithiol biosynthesis cysteine-adding enzyme BshC
SEQF5041|JADGLJ010000008.1
MBF0814469.1
Genome Viewer
NA
AA
468/156
37856-38323
bacillithiol transferase BstA
SEQF5041|JADGLJ010000001.1
MBF0812399.1
Genome Viewer
NA
AA
699/233
328580-327882
acetolactate decarboxylase
SEQF5041|JADGLJ010000005.1
MBF0813947.1
Genome Viewer
NA
AA
1062/354
83940-82879
butyrate kinase
SEQF5041|JADGLJ010000003.1
MBF0813301.1
Genome Viewer
NA
AA
1101/367
141073-142173
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
SEQF5041|JADGLJ010000003.1
MBF0813302.1
Genome Viewer
NA
AA
3174/1058
142166-145339
carbamoyl-phosphate synthase large subunit
SEQF5041|JADGLJ010000006.1
MBF0814210.1
Genome Viewer
NA
AA
990/330
34208-33219
catabolite control protein A
SEQF5041|JADGLJ010000005.1
MBF0814144.1
Genome Viewer
NA
AA
837/279
266089-265253
cytochrome c biogenesis protein CcsA
SEQF5041|JADGLJ010000005.1
MBF0813997.1
Genome Viewer
NA
AA
405/135
129882-129478
cytidine deaminase
SEQF5041|JADGLJ010000007.1
MBF0814370.1
Genome Viewer
NA
AA
1155/385
63311-62157
chromate efflux transporter
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Items 41 - 60
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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